Taxonomic Swap 43641 (Guardado el 17/01/2019)

Genetics show the San Bernadino squirrels should be a subspecies of the newly recognized G. oregonensis.

Genetic data reveal a cryptic species... (Referencia)
Añadido por jwidness en 29 de noviembre de 2018 a las 04:15 AM | Resuelto por jwidness en 17 de enero de 2019
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@loarie this seems like a pretty straightforward swap

Anotado por jwidness hace mas de 5 años

Quoting from Arbogast 2017:

The mtDNA control region sequence data presented here show that although flying squirrels from California are part of the Pacific Coastal mtDNA clade (i.e., G. oregonensis), they are notably divergent from the non-California members of the PC clade.
Our proposed taxonomic change affects subspecies nomenclature in the following ways: 5 subspecies (G. s. californicus, G. s. lascivus, G. s. stephensi, G. s. flaviventris, and G. s. klamathensis) would clearly fall under G. oregonensis and would therefore require the requisite taxonomic change.

Anotado por jwidness hace mas de 5 años

@jwidness there is a taxon framework for mammals that only extends down to species. Since this only involves ssp you should be able to make this swap correct? Before taxon frameworks 'complete taxa' always went down to ssp so this wouldn't have worked then, but the new system should accomodate this unless there's a bug

Also let me know if you want to help curate the mammal taxonomy covered by the framework - right now its using IUCN GMA - not sure if folks are still advocating moving to ASM

Anotado por loarie hace mas de 5 años

@loarie I'm getting the message:
Heads up: One or both of the input taxa involved in this change are within a taxon framework Only site admins or curators of that taxon framework can commit changes affecting covered taxa.

I assume this is because the swap moves the subspecies from one species epithet to a different one, so technically involves a change at the species level.

I'd be happy to help curate mammal taxonomy.

Anotado por jwidness hace mas de 5 años

hmm - that should be allowed so this is a bug. Let me look into this

Anotado por loarie hace mas de 5 años

I was able to add the subspecies G. o. californicus, I just couldn't swap it for G. s. californicus.

Anotado por jwidness hace mas de 5 años

@loarie any progress on this bug?

Anotado por jwidness hace mas de 5 años

@loarie I still don't have an option to commit this, so I'm assuming the bug is still there and I'm not a curator for mammals yet?

Anotado por jwidness hace mas de 5 años

working on this but not done - thanks for your patience

Anotado por loarie hace mas de 5 años

No problem, sorry to keep bothering you.

Anotado por jwidness hace mas de 5 años

@jwidness - this should be fixed. (e.g. iNat should realize that Glaucomys oregonensis californicus is not covered by a curated taxon framework and therefore not protected) Can you try committing this?

Anotado por loarie hace mas de 5 años

The commit worked -- i.e. G. o. californicus replaced G. s. californicus (which is now inactive), but I'm not seeing IDs auto-updated. Not sure if I did something wrong or I just need to wait?

Anotado por jwidness hace mas de 5 años

prob just need to wait

Anotado por loarie hace mas de 5 años

Yep, I checked back seconds before the outage and it was updated, but I couldn't get a comment in before it went down.

Anotado por jwidness hace mas de 5 años

cool!

Anotado por loarie hace mas de 5 años

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